Insertion junction: LMJ.RY0402.159071_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.159071
Chromosome:chromosome 17
Location:4121120
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g729600 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGACTTGATCTACCGTACCTACTGCTCCA
Internal bar code:TCTGTAGTCAAAGAGTTCGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:241
LEAP-Seq percent confirming:33.5858
LEAP-Seq n confirming:2528
LEAP-Seq n nonconfirming:4999
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CCATCACCGTCAACACAGTC
Suggested primer 2:TGGCCAAAGTAGGTGGTAGG