Insertion junction: LMJ.RY0402.159142_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.159142
Chromosome:chromosome 9
Location:3680540
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g390801 (1 of 1) PTHR11918//PTHR11918:SF77 - RADICAL SAM PROTEINS // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAAGCCTCCGCTCCTGTGCAGGTGTCAC
Internal bar code:GTCGCTGCGGGTGCTATTGTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:341
LEAP-Seq percent confirming:99.7329
LEAP-Seq n confirming:1120
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGGCCTTATGTCACTGGT
Suggested primer 2:CACTCGCTGTCCAAAACTCA