Insertion junction: LMJ.RY0402.159402_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.159402
Chromosome:chromosome 2
Location:6061472
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g112750 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTGACCATCGGGGGCCATTGCGTAGTTT
Internal bar code:ACGTACTCTGAACGACCTTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1179
LEAP-Seq percent confirming:99.6729
LEAP-Seq n confirming:3352
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GATGTGCGGGTGTCTAGGAG
Suggested primer 2:GCTCGAACAAAAGGAGTTGC