Insertion junction: LMJ.RY0402.159486_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.159486
Chromosome:chromosome 3
Location:5133032
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g181900 (1 of 38) IPR002048//IPR011992 - EF-hand domain // EF-hand domain pair intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGTTTAGGTACACATGCGGTGATGCGGG
Internal bar code:TTACGTAGGGCCGGCGAGGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1055
LEAP-Seq percent confirming:99.1706
LEAP-Seq n confirming:837
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CAAACCAGACCTAAGCCCAA
Suggested primer 2:GGCAGGACTCTCTGTTGGAG