Insertion junction: LMJ.RY0402.159488_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.159488
Chromosome:chromosome 9
Location:3371028
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g388726 (1 of 1) 3.1.3.32 - Polynucleotide 3'-phosphatase / 2'(3')-polynucleotidase CDS|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGTCCGGCGTGGACGACCTGGCCGGCGT
Internal bar code:ACAGGTCCATCAAGTTAGTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:836
LEAP-Seq percent confirming:99.5215
LEAP-Seq n confirming:832
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TATCCTGCGTGACACTGAGC
Suggested primer 2:GCGTACAGCTAACAGCTCCC