Insertion junction: LMJ.RY0402.159505_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.159505
Chromosome:chromosome 9
Location:6125745
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g405150 PUS1 RNA pseudouridine synthase; (1 of 2) PTHR11142//PTHR11142:SF0 - PSEUDOURIDYLATE SYNTHASE // TRNA PSEUDOURIDINE SYNTHASE-LIKE 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTTCCTGCCGCCGGACGTGAGGGTGCTG
Internal bar code:CGGGGCGACGTAGAATGTCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:866
LEAP-Seq percent confirming:99.7435
LEAP-Seq n confirming:5832
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GATAATGATCCGTGCTCCGT
Suggested primer 2:CTACCTTGGTCTCGCCTCAG