Insertion junction: LMJ.RY0402.159550_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.159550
Chromosome:chromosome 2
Location:4527275
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre02.g100633 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCTGCCAGCAGGGTGGTCAAGCGGGAGC
Internal bar code:GGGGGATACGTGGCAAAAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:688
LEAP-Seq percent confirming:64.0
LEAP-Seq n confirming:208
LEAP-Seq n nonconfirming:117
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CGTATGCATAACGCAGCCTA
Suggested primer 2:TGACGTTAAGCAGGATGCAG