Insertion junction: LMJ.RY0402.159626_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.159626
Chromosome:chromosome 9
Location:6308509
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g406650 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCGGCGCCCTGCTATCCCCCTCCCACCC
Internal bar code:GGTGATAAGAGATGGCCGAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:111
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTATCCAGGGTATCAGCA
Suggested primer 2:ATACCAACTCCCCAACTCCC