Insertion junction: LMJ.RY0402.159731_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.159731
Chromosome:chromosome 1
Location:3432421
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g021900 PUS11 (1 of 1) PTHR11142:SF10 - TRNA PSEUDOURIDINE SYNTHASE; RNA pseudouridine synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGTTTCAGACGTTGCAGGGCGACGGTG
Internal bar code:TGAGTTGTTTGGCCCATGTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:468
LEAP-Seq percent confirming:94.4659
LEAP-Seq n confirming:734
LEAP-Seq n nonconfirming:43
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CTACATGAACGAGAACCGCA
Suggested primer 2:CCGTCAACAGTGGTGTCAAC