Insertion junction: LMJ.RY0402.159764_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.159764
Chromosome:chromosome 13
Location:2389125
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre13.g579550 CGL27 Conserved in the Green Lineage; (1 of 5) IPR002645 - STAS domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGATGTGGTGACGTGGTGATGTGGGTC
Internal bar code:AGCCCCATCTGGTTCCGGTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:246
LEAP-Seq percent confirming:99.863
LEAP-Seq n confirming:729
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AACACGCATGCTCTTGACAG
Suggested primer 2:TAGGAAGAAGAGGGGGAGGA