Insertion junction: LMJ.RY0402.159817_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.159817
Chromosome:chromosome 9
Location:5702162
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g401552 (1 of 2) IPR000104//IPR002893//IPR003072 - Antifreeze protein, type I // Zinc finger, MYND-type // Orphan nuclear receptor, NOR1 type intron|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAAACCAGCAGCGGAATCCACCGCAGAT
Internal bar code:TTGGTCGCTCGACACTGTTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:979
LEAP-Seq percent confirming:99.7053
LEAP-Seq n confirming:2707
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CATATGCGCGTAAACACCAC
Suggested primer 2:ACACGGTAGGAGGACCAGTG