Insertion junction: LMJ.RY0402.160224_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.160224
Chromosome:chromosome 12
Location:1408523
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g488050 FFT5 putative fructan fructosyltransferase; (1 of 1) 2.4.1.99//3.2.1.26 - Sucrose:sucrose fructosyltransferase / Sucrose:sucrose 1-fructosyltransferase // Beta-fructofuranosidase / Saccharase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGGTTGGGCGTCGTCGCGGGGTGTGCAC
Internal bar code:CTACGGGCGCAACTGGTCCCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:866
LEAP-Seq percent confirming:99.6933
LEAP-Seq n confirming:1625
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGAGCGTCTACTTGGGAG
Suggested primer 2:TCTGGACTACTCCTGCCTGG