Insertion junction: LMJ.RY0402.160258_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.160258
Chromosome:chromosome 8
Location:2514217
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre08.g372000 BAF3,CGLD6,CGLD11 chloroplast ATPase CF1 assembly factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGGGAGGGACGCAAGGGGGAGGGCGGA
Internal bar code:ACCGTGTGAGGGTTGATTATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:517
LEAP-Seq percent confirming:99.6923
LEAP-Seq n confirming:324
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTCTAGTGAAGCACGAGG
Suggested primer 2:CTGCCTCCATACACATGCAC