Insertion junction: LMJ.RY0402.160323_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.160323
Chromosome:chromosome 9
Location:1713952
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g396750 CSE18 Predicted protein of CSE family; (1 of 1) IPR000601//IPR022409 - PKD domain // PKD/Chitinase domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCTGGATGCAGCGCCATTTCCATCCCCC
Internal bar code:TACTCGTTCAGGCCCAAAGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:849
LEAP-Seq percent confirming:76.6144
LEAP-Seq n confirming:1222
LEAP-Seq n nonconfirming:373
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CACTGGTGCTGGCTCTATGA
Suggested primer 2:ATGAAGTACAAACCCGGCAG