Insertion junction: LMJ.RY0402.160360_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.160360
Chromosome:chromosome 9
Location:6134177
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g405300 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCCTCGATGTACACACCTCCTGCTACTC
Internal bar code:AATTTTGTTCCGAAAGGGTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:730
LEAP-Seq percent confirming:89.9557
LEAP-Seq n confirming:1827
LEAP-Seq n nonconfirming:204
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GGTAACTTGGGTTGCCTTCA
Suggested primer 2:GAGGAAGAGGAGTTTGTGCG