Insertion junction: LMJ.RY0402.160394_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.160394
Chromosome:chromosome 5
Location:292275
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre05.g233551 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATTGCCGCATGGTGTGCTCCGCCCGGGC
Internal bar code:GGCAGTGGCCCGTGAGCTGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:179
LEAP-Seq percent confirming:40.9496
LEAP-Seq n confirming:414
LEAP-Seq n nonconfirming:597
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGTGTGATTTTGAGAAGC
Suggested primer 2:ACGTATGCGGTATCCCTGAG