Insertion junction: LMJ.RY0402.160510_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.160510
Chromosome:chromosome 3
Location:5373763
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g184500 (1 of 2) PTHR33925:SF3 - PROTEIN ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGATGCCCCAATGATACGGTATGCGATA
Internal bar code:AGCGGGTAGTGTCAGGAGCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:357
LEAP-Seq percent confirming:98.9817
LEAP-Seq n confirming:8554
LEAP-Seq n nonconfirming:88
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTTTTCCTGCCGCCTATT
Suggested primer 2:GGACCAGAGGTTATGACGGA