Insertion junction: LMJ.RY0402.160605_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.160605
Chromosome:chromosome 3
Location:642528
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g145787 HSP22C (1 of 1) IPR000104//IPR002068//IPR008978//IPR031107 - Antifreeze protein, type I // Alpha crystallin/Hsp20 domain // HSP20-like chaperone // Small heat shock protein HSP20; Heat shock protein 22C 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTACTCGCTGAGTCGCTGCAGCTCGTGC
Internal bar code:TCGGCCGGATCTAGTGGGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:440
LEAP-Seq percent confirming:99.7093
LEAP-Seq n confirming:3087
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AAAAGTGATTCCATGCTGGG
Suggested primer 2:ATAGATGGCAACCGATGGAG