Insertion junction: LMJ.RY0402.160617_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.160617
Chromosome:chromosome 17
Location:2949440
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g720000 CCT9 (1 of 1) IPR002423//IPR027409 - Chaperonin Cpn60/TCP-1 family // GroEL-like apical domain; T-complex protein 1, eta subunit 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCATGCTTGTGTCGTGAACCAAGTTGT
Internal bar code:ATGCACGGTCTTCAAAAGCACC

Confirmation - LEAP-Seq

LEAP-Seq distance:177
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ACAAGCCGGTTGGTTACAAG
Suggested primer 2:CGTTCTGGGAATGGACAGAT