Insertion junction: LMJ.RY0402.160741_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.160741
Chromosome:chromosome 5
Location:1656138
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g243050 TRX3,TRXf2,TRXF2 (1 of 1) PTHR10438:SF258 - THIOREDOXIN F1, CHLOROPLASTIC-RELATED; Thioredoxin f2, chloroplastic CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGTGGTGGACTTCTACACCGTGAGTGAC
Internal bar code:GGACAGGTCCGAGGACGCGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:0
LEAP-Seq percent confirming:29.1667
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:119
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCCGTCTCTCCGTCTTGT
Suggested primer 2:TGGTACGTCTCCAAATGGGT