Insertion junction: LMJ.RY0402.160790_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.160790
Chromosome:chromosome 12
Location:7484218
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g556050 PRPL9 Chloroplast ribosomal protein L9; (1 of 1) K02939 - large subunit ribosomal protein L9 (RP-L9, MRPL9, rplI) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGTAAAGGACATTTACTTCTTGGCCTTC
Internal bar code:GATAAAGAGCGGTGTGACTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:752
LEAP-Seq percent confirming:99.7442
LEAP-Seq n confirming:780
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AGACATCAGCATGTCGCAAG
Suggested primer 2:AAGAAGCTGGAGGAGAAGGC