Insertion junction: LMJ.RY0402.160805_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.160805
Chromosome:chromosome 16
Location:394327
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g693601 ISG-C2,ISG2 (1 of 5) PTHR16631//PTHR16631:SF9 - FAMILY NOT NAMED // GLUCAN 1,3-BETA-GLUCOSIDASE; Hydroxyproline-rich cell wall protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACCCCTTCCAACCGCCCCCCCCCCCCC
Internal bar code:CCCGAGCTGCAGTGTACAAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:225
LEAP-Seq percent confirming:99.8186
LEAP-Seq n confirming:7154
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCAGGTTGATAGCGTCC
Suggested primer 2:AGGAGAGGGAGAAGGAGACG