Insertion junction: LMJ.RY0402.160899_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.160899
Chromosome:chromosome 8
Location:3382562
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre08.g374300 CGL115 (1 of 1) K19323 - ataxin-10 (ATXN10); Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAAGCCTGGGGGCGTGCGGCAGCGGAGAA
Internal bar code:GTGCGCACGGTCGCAAGCGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1027
LEAP-Seq percent confirming:99.8277
LEAP-Seq n confirming:2317
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCATGAAAAGAGGCGTGT
Suggested primer 2:AAGTCTGCAACACCCAAACC