Insertion junction: LMJ.RY0402.160980_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.160980
Chromosome:chromosome 3
Location:3863106
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g171000 (1 of 1) IPR003072//IPR006569//IPR008942 - Orphan nuclear receptor, NOR1 type // CID domain // ENTH/VHS 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCTGGTGGTCTGCCGATTGTTCAATGGA
Internal bar code:CTGGCTGTAAATCCATCTGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:367
LEAP-Seq percent confirming:98.0198
LEAP-Seq n confirming:297
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGAACATGTGGTCGTGTC
Suggested primer 2:ACCCTGAGCCCTAAACCAGT