Insertion junction: LMJ.RY0402.160980_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.160980
Chromosome:chromosome 3
Location:3863358
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g171000 (1 of 1) IPR003072//IPR006569//IPR008942 - Orphan nuclear receptor, NOR1 type // CID domain // ENTH/VHS 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCCAGCATGAAAGTCGTGATGCAGCACA
Internal bar code:ACCGCGTGTTTTGCCATCGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:797
LEAP-Seq percent confirming:99.0162
LEAP-Seq n confirming:1409
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCTCATTATTGCTTGGGC
Suggested primer 2:AAACAAATGGAGCAACCCAG