Insertion junction: LMJ.RY0402.160991_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.160991
Chromosome:chromosome 1
Location:4829832
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g033500 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCTTCGGGAATGGAATAAACTCCCCCCA
Internal bar code:TGCCCCGCTGACACACGGCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:410
LEAP-Seq percent confirming:98.7179
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAGGATGTGTGCATGTAG
Suggested primer 2:GTACCCTCAGGCTTGGTGAA