Insertion junction: LMJ.RY0402.161228_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.161228
Chromosome:chromosome 6
Location:2445811
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g268650 FAP279 (1 of 8) PF14580 - Leucine-rich repeat (LRR_9); Flagellar Associated Protein 279 5'UTR|CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGACGAACACCTCGAATCCGCGCAGTTT
Internal bar code:CACCTGTACGTAGTGCGCGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:479
LEAP-Seq percent confirming:99.4709
LEAP-Seq n confirming:188
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCGTTAACCAGCTCATCC
Suggested primer 2:GCCAGGAAGTTGAGACAAGC