Insertion junction: LMJ.RY0402.161399_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.161399
Chromosome:chromosome 3
Location:4475297
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g176000 (1 of 781) IPR000104 - Antifreeze protein, type I 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTATGAAAGTTCCTCAGGATGCGCGAAT
Internal bar code:AACAAGACATGCTGGGTTCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:607
LEAP-Seq percent confirming:99.5157
LEAP-Seq n confirming:411
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGGAAAATAGGTCCGTGA
Suggested primer 2:GCCAATTGTGTTTGTCGATG