Insertion junction: LMJ.RY0402.161467_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.161467
Chromosome:chromosome 5
Location:2725406
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre05.g236802 (1 of 71) IPR016181 - Acyl-CoA N-acyltransferase 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTTGGTGCCAGCCACCCTTACATGCGCA
Internal bar code:GACGACGCTGTTGCTCGGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:165
LEAP-Seq percent confirming:99.773
LEAP-Seq n confirming:879
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CCACGCTACATCCACCTCTT
Suggested primer 2:CTACGGAAAGATTGCGCTTC