Insertion junction: LMJ.RY0402.161499_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.161499
Chromosome:chromosome 9
Location:5860122
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g402330 (1 of 1) IPR000104//IPR000719//IPR001245//IPR002290//IPR011009//IPR020635//IPR029016 - Antifreeze protein, type I // Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // GAF domain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGAGGCGACGCAGGAAGTCTAGCAGGAG
Internal bar code:GTGGCACATGCCCACAGCTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:951
LEAP-Seq percent confirming:52.6882
LEAP-Seq n confirming:98
LEAP-Seq n nonconfirming:88
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGTTACCAGATGCCACTC
Suggested primer 2:GTGTGTGTGTGTGTGTGCGT