Insertion junction: LMJ.RY0402.161594_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.161594
Chromosome:chromosome 3
Location:4611342
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g177100 (1 of 10) PTHR31867:SF1 - EXPANSIN-A1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAGACACGCTGGCCCGCACGCACGCCCC
Internal bar code:TTGAGCCCTTTACTACCCATCC

Confirmation - LEAP-Seq

LEAP-Seq distance:173
LEAP-Seq percent confirming:99.5485
LEAP-Seq n confirming:441
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGATTGTGTGCCTGTTTGTG
Suggested primer 2:TAGTTTGGCTCTATGGCGCT