Insertion junction: LMJ.RY0402.161621_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.161621
Chromosome:chromosome 12
Location:4050704
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g517451 (1 of 1) PTHR31773:SF9 - METACASPASE-1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTCTGTAGGACATGTCAACCTAGTATCA
Internal bar code:CGTCCGTTCTCTAAGTTGTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1138
LEAP-Seq percent confirming:99.5937
LEAP-Seq n confirming:2451
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGCCTCGCTGTAAAACA
Suggested primer 2:ACATTTGAAGCGTGCACAAG