Insertion junction: LMJ.RY0402.161659_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.161659
Chromosome:chromosome 6
Location:7525815
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g300600 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAAATGGTGAAAAGGTTGTTTCGGGCAG
Internal bar code:AGCACACCACGTCAGGAGCGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1037
LEAP-Seq percent confirming:93.3861
LEAP-Seq n confirming:1652
LEAP-Seq n nonconfirming:117
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTACGCCCTACTCCTCTT
Suggested primer 2:CACCGTCAGGTTTCGTAGGT