Insertion junction: LMJ.RY0402.161818_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.161818
Chromosome:chromosome 11
Location:3403958
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g480700 (1 of 2) IPR000104//IPR000945 - Antifreeze protein, type I // Dopamine beta-hydroxylase-related intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAGATGGGGTGTTTGCAACTGGGGATTC
Internal bar code:CATGGACTGTGGATTAGATCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:91
LEAP-Seq percent confirming:2.85714
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CCACGTGTGTGTGTGTGTGT
Suggested primer 2:CGGTAAATTGGTGGGTATCG