Insertion junction: LMJ.RY0402.162040_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.162040
Chromosome:chromosome 3
Location:592301
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g145567 CGL18 Conserved in the Green Lineage; (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCACTTGCGCAGGTACTTGTCCTTGCCCG
Internal bar code:AGTTTTTGTGGGAGTCGAGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:623
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:276
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AACTTGCGTAGGAAGCCTGA
Suggested primer 2:AATTCAGACGCATTTCCCAC