Insertion junction: LMJ.RY0402.162237_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.162237
Chromosome:chromosome 1
Location:7872634
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g060712 (1 of 1) IPR002867//IPR031127 - IBR domain // E3 ubiquitin ligase RBR family intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCACCTGTAGTGGGTCAGTGCGAGGCGGG
Internal bar code:CTGCGCTTTCCCGGCCGTTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:178
LEAP-Seq percent confirming:99.5602
LEAP-Seq n confirming:1811
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGGCAGGAGTGAAATACT
Suggested primer 2:GGCTGAAGACTCGGAGTACG