Insertion junction: LMJ.RY0402.162274_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.162274
Chromosome:chromosome 3
Location:8544508
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g201776 (1 of 1) IPR006575//IPR016135 - RWD domain // Ubiquitin-conjugating enzyme/RWD-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACGTCACCGTCCGAGCCATCCTTCAAAT
Internal bar code:ATCGGAGGGCGGTTCGGCTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:657
LEAP-Seq percent confirming:75.5597
LEAP-Seq n confirming:3645
LEAP-Seq n nonconfirming:1179
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGTATGTGCTGGGTAGTT
Suggested primer 2:GAGGAGGACTTCGACGTGAG