Insertion junction: LMJ.RY0402.162293_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.162293
Chromosome:chromosome 15
Location:827345
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre15.g639650 RAP24,OPR92,NCL11 Nuclear Control of chloroplast Like 11 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGTTGCTTGCAGCTCCTCCAGAGTCCGA
Internal bar code:ATCCGCACGTCAGTAATAAGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:605
LEAP-Seq percent confirming:84.3342
LEAP-Seq n confirming:646
LEAP-Seq n nonconfirming:120
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CATTTGAAAGCTCCTGAGGC
Suggested primer 2:GCCAACACGTACCTGACCTT