Insertion junction: LMJ.RY0402.162308_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.162308
Chromosome:chromosome 3
Location:644010
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g145807 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCAAACGCCTGTCGCCTGCCTGTTTGAT
Internal bar code:TGTCGTGCCGACCTACTAACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:361
LEAP-Seq percent confirming:99.6207
LEAP-Seq n confirming:1576
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCCAGCAACAGCTATAAA
Suggested primer 2:TTCCGTTGCAATTTCTGTTG