Insertion junction: LMJ.RY0402.162457_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.162457
Chromosome:chromosome 12
Location:3977993
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g516650 STPK6,STK6 Serine/threonine protein kinase; (1 of 1) IPR000719//IPR001245//IPR002290//IPR011009//IPR011050//IPR020635 - Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Pectin lyase fold/virulence factor // Tyrosine-protein kinase, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCTGCGAGCTGGCCCTGTACGACGGCTG
Internal bar code:ACATAATCCGAGGGGACAGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1204
LEAP-Seq percent confirming:99.6918
LEAP-Seq n confirming:1941
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:ATATATCAAGTGCTGCCCGC
Suggested primer 2:AACAGCAACATAACCCTGGC