Insertion junction: LMJ.RY0402.162485_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.162485
Chromosome:chromosome 3
Location:6377701
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g194100 MAPKKK3 (1 of 1) PF14381 - Ethylene-responsive protein kinase Le-CTR1 (EDR1); Mitogen-Activated Protein Kinase Kinase Kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTGATGATTCTGTCCCGTTGGTCGTCTG
Internal bar code:CCCGACAACGAACAATTGGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1056
LEAP-Seq percent confirming:99.8139
LEAP-Seq n confirming:5899
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCGAGTTTAGGCAGGTTG
Suggested primer 2:GTGTGTTGCAATCGTCCATC