Insertion junction: LMJ.RY0402.162585_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.162585
Chromosome:chromosome 3
Location:5881425
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g189700 (1 of 2) K07735 - putative transcriptional regulator (algH) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGGAAACTTGATGGGTGACGAGAGAGG
Internal bar code:ACTTCATTCTCGCTGCACTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:270
LEAP-Seq percent confirming:99.0573
LEAP-Seq n confirming:1366
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCTGCTTTACTACCCGC
Suggested primer 2:GATCGGCATCAACGGTTAGT