Insertion junction: LMJ.RY0402.162639_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.162639
Chromosome:chromosome 17
Location:2593759
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g716900 (1 of 1) IPR002104//IPR010998//IPR011010 - Integrase, catalytic domain // Integrase, Lambda-type, N-terminal // DNA breaking-rejoining enzyme, catalytic core 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCTCGTCAGCCCGGCCATAGTGGCCGGT
Internal bar code:GAGCAAGCATGAAGGTGTCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:763
LEAP-Seq percent confirming:97.8462
LEAP-Seq n confirming:2226
LEAP-Seq n nonconfirming:49
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCCTCTTACGAACGCAAC
Suggested primer 2:GGCGTAGCCAGCAAGTATTC