Insertion junction: LMJ.RY0402.162789_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.162789
Chromosome:chromosome 6
Location:5241310
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g282251 (1 of 12) IPR000104//IPR002893 - Antifreeze protein, type I // Zinc finger, MYND-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCTGATCGCTCCTCAACACTCCCCCCTC
Internal bar code:GGTTCGTCCCAAAACAGAGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:495
LEAP-Seq percent confirming:92.9502
LEAP-Seq n confirming:50063
LEAP-Seq n nonconfirming:3797
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:TTCACATCCCCGAAGAAGAC
Suggested primer 2:CGGTGTGTGTGTGTGTGTGT