Insertion junction: LMJ.RY0402.162896_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.162896
Chromosome:chromosome 3
Location:4063467
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g172600 (1 of 1) IPR000104//IPR001841//IPR011990//IPR013083 - Antifreeze protein, type I // Zinc finger, RING-type // Tetratricopeptide-like helical domain // Zinc finger, RING/FYVE/PHD-type 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACGAGCCCATCACGACGCCGTGCCGGCA
Internal bar code:TAATCACAATTCCTGTCTTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:55
LEAP-Seq percent confirming:98.9111
LEAP-Seq n confirming:545
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCTAGCTCCTTCCGTGGAC
Suggested primer 2:ATAGGCGTTGTTGAGGATGG