Insertion junction: LMJ.RY0402.162938_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.162938
Chromosome:chromosome 5
Location:3378352
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g240900 (1 of 1) IPR000001//IPR024079 - Kringle // Metallopeptidase, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTTTGTGTGTATCTGTTAGTATGTGATG
Internal bar code:AGGCAGGTGGCTAACCTCGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:180
LEAP-Seq percent confirming:22.0721
LEAP-Seq n confirming:1078
LEAP-Seq n nonconfirming:3806
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCAACCCGGTCATGTACT
Suggested primer 2:ACTCTCTCTCTCTCGCACGC