Insertion junction: LMJ.RY0402.163174_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.163174
Chromosome:chromosome 17
Location:5403649
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g736750 (1 of 2) PTHR22640//PTHR22640:SF2 - UNCHARACTERIZED // STRUCTURAL MAINTENANCE OF CHROMOSOMES FLEXIBLE HINGE DOMAIN-CONTAINING PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTACCGAGCCCCTGGAGGTAGGCACCCG
Internal bar code:AAGTGATGAAGTGCCACACAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1128
LEAP-Seq percent confirming:98.7486
LEAP-Seq n confirming:5208
LEAP-Seq n nonconfirming:66
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCAGAGAGAACGAGCAGC
Suggested primer 2:TGACGATGAGCTTCAACTGG