Insertion junction: LMJ.RY0402.163227_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.163227
Chromosome:chromosome 9
Location:4349702
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g395065 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATACTGCAAGGCAGGGCCGAGCACACGC
Internal bar code:TAGGGTTACCGCCCCGTGTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:846
LEAP-Seq percent confirming:99.7775
LEAP-Seq n confirming:2242
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAGTCACCGGTATTCTGT
Suggested primer 2:CGAATTGCTAAGTGTGCGAA