Insertion junction: LMJ.RY0402.163528_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.163528
Chromosome:chromosome 3
Location:396580
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g144887 (1 of 1) IPR000048//IPR003590//IPR006553 - IQ motif, EF-hand binding site // Leucine-rich repeat, ribonuclease inhibitor subtype // Leucine-rich repeat, cysteine-containing subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCCGGCGCCGCCCACCTGGGGCGCACGC
Internal bar code:TCGTGGGGACGAGGCGTCTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:48
LEAP-Seq percent confirming:99.5556
LEAP-Seq n confirming:224
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCAGGTTGAGGCAGTAG
Suggested primer 2:TACCAGCCCAAACTAAACCG