Insertion junction: LMJ.RY0402.163598_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.163598
Chromosome:chromosome 16
Location:5729786
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre16.g678850 (1 of 1) 2.3.3.10 - Hydroxymethylglutaryl-CoA synthase / Hydroxymethylglutaryl coenzyme alpha-condensing enzyme 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTAACGTACTAGCATCTTTGCTATGATA
Internal bar code:AGTTAGTCACTCTACCAATGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:768
LEAP-Seq percent confirming:99.3384
LEAP-Seq n confirming:6156
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGGCACTACCTGGAATGG
Suggested primer 2:GGCTTGGCTAGGACTCACTG